Snai3 syntax in mouse based on all samples
Summary of Snai3
Gene name: Snai3, snail family transcriptional repressor 3
Number of Snai3 PWM hits (motifs) on mouse genome: 26,029
Number of Snai3 PWM hits (motifs) on mouse accessible genome: 9,839
Number of summits with Snai3 motif per sample (min/median/max): 176 / 571 / 1,444
Number of summits with Snai3 footprinting per sample (min/median/max): 10 / 30 / 75
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (111,663 extended summits (401bp) with Snai3 motifs)
Footprinting-based (4,099 extended summits (401bp) with Snai3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Snai3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Snai3.
The number of Snai3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Snai3.
View Snai3 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.