Sox18 syntax in mouse based on all samples
Summary of Sox18
Gene name: Sox18, SRY-box transcription factor 18
Number of Sox18 PWM hits (motifs) on mouse genome: 259,527
Number of Sox18 PWM hits (motifs) on mouse accessible genome: 62,756
Number of summits with Sox18 motif per sample (min/median/max): 286 / 2,892 / 7,477
Number of summits with Sox18 footprinting per sample (min/median/max): 10 / 127 / 384
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (475,940 extended summits (401bp) with Sox18 motifs)
Footprinting-based (13,107 extended summits (401bp) with Sox18 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Sox18 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Sox18.
The number of Sox18 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Sox18.
View Sox18 in a specific mouse sample

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