TP53 syntax in human based on all samples
Summary of TP53
Gene name: TP53, tumor protein p53
Number of TP53 PWM hits (motifs) on human genome: 635,879
Number of TP53 PWM hits (motifs) on human accessible genome: 221,022
Number of summits with TP53 motif per sample (min/median/max): 3,469 / 10,683 / 39,968
Number of summits with TP53 footprinting per sample (min/median/max): 169 / 742 / 2,494
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (4,572,295 extended summits (401bp) with TP53 motifs)
Footprinting-based (216,096 extended summits (401bp) with TP53 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of TP53 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is TP53.
The number of TP53 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is TP53.
View TP53 in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.