Tbp syntax in mouse based on all samples
Summary of Tbp
Gene name: Tbp, TATA-box binding protein
Number of Tbp PWM hits (motifs) on mouse genome: 495,659
Number of Tbp PWM hits (motifs) on mouse accessible genome: 81,346
Number of summits with Tbp motif per sample (min/median/max): 412 / 2,153 / 9,682
Number of summits with Tbp footprinting per sample (min/median/max): 6 / 79 / 466
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,354,160 extended summits (401bp) with Tbp motifs)
Footprinting-based (27,325 extended summits (401bp) with Tbp footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Tbp partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Tbp.
The number of Tbp partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Tbp.
View Tbp in a specific mouse sample

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