Thap1 syntax in mouse based on all samples
Summary of Thap1
Gene name: Thap1, THAP domain containing 1
Number of Thap1 PWM hits (motifs) on mouse genome: 219,663
Number of Thap1 PWM hits (motifs) on mouse accessible genome: 64,091
Number of summits with Thap1 motif per sample (min/median/max): 1,691 / 4,081 / 9,457
Number of summits with Thap1 footprinting per sample (min/median/max): 19 / 94 / 218
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,724,320 extended summits (401bp) with Thap1 motifs)
Footprinting-based (28,040 extended summits (401bp) with Thap1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Thap1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Thap1.
The number of Thap1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Thap1.
View Thap1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.