Summary of Thra	Switch to sample-specific view in mouse
Gene name:	Thra, thyroid hormone receptor alpha
Number of Thra PWM hits (motifs) on mouse genome:	300,590
Number of Thra PWM hits (motifs) on mouse accessible genome:	106,090
Number of summits with Thra motif per sample (min/median/max):	769 / 4,588 / 12,371
Number of summits with Thra footprinting per sample (min/median/max):	45 / 311 / 690

Positional profile of TF binding sites For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.

Motif-based (1,971,431 extended summits (401bp) with Thra motifs)

Footprinting-based (81,958 extended summits (401bp) with Thra footprinting)

Density profile of TF binding sites For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.

The number of Thra partners on the same summit (Motif-based)

Density profile of all expressed TFs in mouse (Motif-based) Red dot is Thra.

The number of Thra partners on the same summit (Footprinting-based)

Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Thra.