Vax1 syntax in mouse based on all samples
Summary of Vax1
Gene name: Vax1, ventral anterior homeobox 1
Number of Vax1 PWM hits (motifs) on mouse genome: 152,983
Number of Vax1 PWM hits (motifs) on mouse accessible genome: 30,079
Number of summits with Vax1 motif per sample (min/median/max): 133 / 1,738 / 4,432
Number of summits with Vax1 footprinting per sample (min/median/max): 2 / 110 / 295
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (74,385 extended summits (401bp) with Vax1 motifs)
Footprinting-based (2,424 extended summits (401bp) with Vax1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Vax1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Vax1.
The number of Vax1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Vax1.
View Vax1 in a specific mouse sample

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