Vsx1 syntax in mouse based on all samples
Summary of Vsx1
Gene name: Vsx1, visual system homeobox 1
Number of Vsx1 PWM hits (motifs) on mouse genome: 65,406
Number of Vsx1 PWM hits (motifs) on mouse accessible genome: 17,696
Number of summits with Vsx1 motif per sample (min/median/max): 97 / 429 / 3,365
Number of summits with Vsx1 footprinting per sample (min/median/max): 1 / 25 / 160
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (13,416 extended summits (401bp) with Vsx1 motifs)
Footprinting-based (432 extended summits (401bp) with Vsx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Vsx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Vsx1.
The number of Vsx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Vsx1.
View Vsx1 in a specific mouse sample

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