Number of Vsx2 PWM hits (motifs) on mouse accessible genome:
15,655
Number of summits with Vsx2 motif per sample (min/median/max):
69 / 1,010 / 3,925
Number of summits with Vsx2 footprinting per sample (min/median/max):
2 / 53 / 194
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (54,179 extended summits (401bp) with Vsx2 motifs)
Footprinting-based (2,073 extended summits (401bp) with Vsx2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Vsx2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Vsx2.
The number of Vsx2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Vsx2.