Zkscan14 syntax in mouse based on all samples
Summary of Zkscan14
Gene name: Zkscan14, Zinc Finger Protein 394
Number of Zkscan14 PWM hits (motifs) on mouse genome: 71,495
Number of Zkscan14 PWM hits (motifs) on mouse accessible genome: 18,631
Number of summits with Zkscan14 motif per sample (min/median/max): 105 / 689 / 1,780
Number of summits with Zkscan14 footprinting per sample (min/median/max): 3 / 47 / 138
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (347,661 extended summits (401bp) with Zkscan14 motifs)
Footprinting-based (13,617 extended summits (401bp) with Zkscan14 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Zkscan14 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Zkscan14.
The number of Zkscan14 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Zkscan14.
View Zkscan14 in a specific mouse sample

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